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cli: renku rm modules/__init__.py [...] #3693

Description

@schymans

Describe the bug

I tried to remove all files from a folder using renku rm modules/*.

Details

When I executed afterwards git rm -r modules it worked without problems.

Renku version: 2.7.0
OS: Linux (#1 SMP Progress Linux 5.10.197-1~progress5+u1 (2023-10-04))
Python: 3.10.13

Traceback

Traceback (most recent call last):
  File "pydantic/decorator.py", line 40, in pydantic.decorator.validate_arguments.validate.wrapper_function
  File "pydantic/decorator.py", line 134, in pydantic.decorator.ValidatedFunction.call
  File "pydantic/decorator.py", line 206, in pydantic.decorator.ValidatedFunction.execute
  File "[...]/site-packages/renku/command/remove.py", line 112, in _remove
    run(["git", "rm", "-rf"] + final_sources, check=True)
  File "[...]/subprocess.py", line 526, in run
    raise CalledProcessError(retcode, process.args,
subprocess.CalledProcessError: Command '['git', 'rm', '-rf', '/home/stan/notebooks/jupyter/renku/fortress/modules/__init__.py', '/home/stan/notebooks/jupyter/renku/fortress/modules/plotting.py', '/home/stan/notebooks/jupyter/renku/fortress/modules/__pycache__']' returned non-zero exit status 128.

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