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Hongda-Zhao/README.md

Hongda Zhao

Bioinformatics PhD candidate at Kyoto University.

I study viruses hidden in eukaryotic genomes using computational genomics. I also explore protein language models and AI for Science.

Visit my personal website →

Notes on life, technology, research, and academic activities are collected there.

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  1. DJR-MCP-Finder DJR-MCP-Finder Public

    A reproducible protein-language-model pipeline for detecting double-jelly-roll major capsid proteins from FASTA files.

    Python 1

  2. bio-gene-to-reference-tree bio-gene-to-reference-tree Public

    Auditable agent skill for resolving protein queries, selecting references, and planning reproducible phylogenetic trees.

    Python 1