NCI-Cancer Genomics Research Lab/FNLCR

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1. MoCCA-SV MoCCA-SV Public

   A Flexible Ensemble Framework for Structural Variant Analysis

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2. GEMSCAN GEMSCAN Public

   Joint variant calling with GATK4 HaplotypeCaller, Google DeepVariant 1.0.0 and Strelka2, coordinated via Snakemake.

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3. TriosCompass_v2 TriosCompass_v2 Public

   Trios analysis workflow written in Snakemake

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4. cgrHPV16 cgrHPV16 Public

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5. TypeSeqHPV TypeSeqHPV Public

   NCI CGR laboratory HPV typing analysis workflows

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6. QIIME_pipeline QIIME_pipeline Public

   CGR's QIIME microbiome pipeline

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