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Rotate nucleotides in output

Status: Open.

#51 In collaborativebioinformatics/STRdust;

· wdecoster opened on Oct 14, 2021

Properly sort chromosomes in output file

Status: Open.

#50 In collaborativebioinformatics/STRdust;

· wdecoster opened on Oct 14, 2021

dustspec.split("'")[1].split("_") fails with decoy contigs

Status: Open.

#49 In collaborativebioinformatics/STRdust;

· wdecoster opened on Oct 14, 2021

How do sequences end up being empty?

Status: Open.

#48 In collaborativebioinformatics/STRdust;

· wdecoster opened on Oct 14, 2021

_validate_path writes a 'test' directory

Status: Open.

#47 In collaborativebioinformatics/STRdust;

· wdecoster opened on Oct 14, 2021

setup CI

Status: Open.

#45 In collaborativebioinformatics/STRdust;

· wdecoster opened on Oct 14, 2021

output number of reads supporting a call

Status: Open.

#40 In collaborativebioinformatics/STRdust;

· wdecoster opened on Oct 13, 2021

Not crucial now: output to VCF while running

Status: Open.

#35 In collaborativebioinformatics/STRdust;

· wdecoster opened on Oct 13, 2021

Find heuristics to pre-filter insertions that we don't want spoa to spend too much time on

Status: Open.

#33 In collaborativebioinformatics/STRdust;

· wdecoster opened on Oct 13, 2021

Github - Methods + Results

Status: Open.

#31 In collaborativebioinformatics/STRdust;

· lfpaulin opened on Oct 13, 2021

Analysis: how good is STRdust

Status: Open.

#29 In collaborativebioinformatics/STRdust;

· lfpaulin opened on Oct 13, 2021

Github: add how to install

Status: Open.

#28 In collaborativebioinformatics/STRdust;

· lfpaulin opened on Oct 13, 2021