CancerGenomics

Group project for Cancer Genomics and Class Discovery Spring 2018 Math 891-002

Name		Name	Last commit message	Last commit date
DCM		DCM
Kentaro		Kentaro
Papers		Papers
Presentation		Presentation
RNA_Data		RNA_Data
Results		Results
.gitignore		.gitignore
00_Libs_Data_DL.R		00_Libs_Data_DL.R
01_DNA_Rep_Clustering.R		01_DNA_Rep_Clustering.R
01_Subtype_Replication.R		01_Subtype_Replication.R
02_DCM.R		02_DCM.R
02_Survival_Analysis.R		02_Survival_Analysis.R
03_Cluster_Comparison.R		03_Cluster_Comparison.R
03_PCA_visuals.R		03_PCA_visuals.R
LICENSE		LICENSE
README.md		README.md
TCGA_489_UE.top1500.txt		TCGA_489_UE.top1500.txt
ddr_full_sample_cor_heatmap.svg		ddr_full_sample_cor_heatmap.svg
ddr_full_sample_dist_heatmap.svg		ddr_full_sample_dist_heatmap.svg
dna_repair_genelist.csv		dna_repair_genelist.csv
dnarep_mat.csv		dnarep_mat.csv
full_gene_list.csv		full_gene_list.csv
full_rna_seq_mat.csv		full_rna_seq_mat.csv
genomics.bib		genomics.bib
proposal.pdf		proposal.pdf
proposal.tex		proposal.tex
rnaSeq.rda		rnaSeq.rda

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