Map Allele Frequency

[mandresapata]

Dear Manny,

I am trying to have access to an old raster.RData that was used as for plotting allele frequencies in world map:

load(url("http://github.com/mgimond/Spatial/raw/master/Data/raster.RData"))

Is this file not available anymore or has a different name in your repository?

Thank you in advance,

Mario

[mgimond]

Hi Mario,

That data file is no longer used in my online text. But it is available in the older version of the web resource as follows:

library(raster)
load(url("https://github.com/mgimond/Spatial_pre2021/raw/refs/heads/master/Data/raster.RData"))

However, it does not house an allele frequency map. I don't recall using such a dataset in my text. Do you recall where this dataset may have been referenced?

Cheers,
Manny

[mandresapata]

Thank you Manny, the data set is public and comes from here (allele frequencies for lactose persistence alleles): https://www.ucl.ac.uk/biosciences/gee/molecular-and-cultural-evolution-lab/global-lactase-persistence-association-database-glad And those are the type of map that I am traying to plot, Best!

…

On Mon, Sep 23, 2024 at 4:54 PM Manny Gimond ***@***.***> wrote: Hi Mario, That data file is no longer used in my online text. But it is available in the older version of the web resource as follows: library(raster) load(url("https://github.com/mgimond/Spatial_pre2021/raw/refs/heads/master/Data/raster.RData <https://urldefense.com/v3/__https://github.com/mgimond/Spatial_pre2021/raw/refs/heads/master/Data/raster.RData__;!!IKRxdwAv5BmarQ!caJGMRE1s1INjXw6LYOkjfLjVQZfaGfd0fSB1PJXuLjETOAlmL6v7Btfg9dOxljrg5bMG1jaNHiPLoeVqrNLWYF6Prs$>")) However, it does not house an allele frequency map. I don't recall using such a dataset in my text. Do you recall where this dataset may have been referenced? Cheers, Manny — Reply to this email directly, view it on GitHub <https://urldefense.com/v3/__https://github.com/mgimond/Spatial/issues/8*issuecomment-2369798999__;Iw!!IKRxdwAv5BmarQ!caJGMRE1s1INjXw6LYOkjfLjVQZfaGfd0fSB1PJXuLjETOAlmL6v7Btfg9dOxljrg5bMG1jaNHiPLoeVqrNLFX2Ch4U$>, or unsubscribe <https://urldefense.com/v3/__https://github.com/notifications/unsubscribe-auth/AQDHXATI2OJT7HFGK3MW3CTZYCS3XAVCNFSM6AAAAABOW56V7SVHI2DSMVQWIX3LMV43OSLTON2WKQ3PNVWWK3TUHMZDGNRZG44TQOJZHE__;!!IKRxdwAv5BmarQ!caJGMRE1s1INjXw6LYOkjfLjVQZfaGfd0fSB1PJXuLjETOAlmL6v7Btfg9dOxljrg5bMG1jaNHiPLoeVqrNLIy4onEM$> . You are receiving this because you authored the thread.Message ID: ***@***.***>