bdf-toolbox

Programmatic interface to Synapse services for Python

Grounding of biomedical named entities with contextual disambiguation

A toolkit for biomedical data integration and harmonization

Extract FHIR data, Transform with NLP and DEID tools, and then Load FHIR data into a SQL Database for analysis

[VLDB '25] Magneto combines small and large language models to provide cost-effective schema matching.

INDRA Context Graph Extension

MIDRC-REACT Representativeness Exploration and Comparison Tool

Extract FHIR data from your EHR easily and completely

A framework for designing, executing, and distributing SQL queries packaged as "studies", e.g., for quality monitoring, clinical research, or public health

An LLM-based agent for tabular data harmonization, powered by the bdi-kit library.

The Universal Discovery Interface Grammar.

A data metrics study for the Cumulus project

Public repository for the BDF Chatbot developed by ICF

CHARMTwinsight is part of the CHARM suite of tools, focused on predictive analytics via flexible model hosting and synthetic data generation and storage in via standards-compliant FHIR.