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elastic-network-model

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Ruqing1963 / kakutani-statistical-pharmacology-synthesis

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Kakutani–KMS theory of ligand-induced conformational phase transitions: integrating article of the Statistical Pharmacology via Kakutani Dichotomy series (Papers I–VII), with LaTeX source, PDF and verification script.

reproducible-research allostery protein-dynamics wasserstein-distance elastic-network-model computational-pharmacology kakutani-dichotomy conformational-ensembles statistical-pharmacology kms-states feldman-hajek mathematical-biophysics
  • Updated Sep 29, 2026
  • TeX

enesemretas / hingeprot_fortran

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Colab/Jupyter UI wrapper for the HingeProt pipeline to predict protein hinges and rigid parts using elastic network models (GNM/ANM), with chain selection, CA-only support, and 3D visualization.

bioinformatics protein-structure computational-biology protein-dynamics structural-bioinformatics molecular-modeling anm gnm rigid-body elastic-network-model hingeprot gaussian-network-model anisotropic-network-model hinge-detection protein-motion
  • Updated Jan 27, 2026
  • Jupyter Notebook

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