phd-tools

42 AI agent skills for literature review, academic writing, citation verification, conference submission, rebuttal, publication, and presentations.

💬 Trace citation chains for any concept across research papers and render them as an interactive graph.

科研工作流 Claude 技能：覆盖选题、文献、方法、实验、写作、自审、Rebuttal、投稿九大阶段，支持 mentor / reviewer / mixed 三种模式（触发词含 reviewer mode、审查模式、mixed mode、混合模式），充当贴身导师与挑刺审稿人。

Professional Scientific Plotting for Academic Publications - From Data to Publication-Ready Figures

PhD manuscript repetition detector & fixer, powered by Gemini AI. Finds semantic repetitions across chapters and suggests rewrites.

PEPICO workstation for VMI photoelectron / ion-TOF coincidence analysis (PySide6 + pyAbel): trigger pairing, TOF selection, VMI centering, Abel inversion, session round-trip.

Trace research papers recursively to map relevant citations and build interactive knowledge graphs based on keywords or semantic similarity.

BioInfo Tools

Research Paper Automation Toolkit — Python tools that automate academic workflows: extract figures from PDFs, convert papers to PowerPoint slides, export annotations, generate LaTeX figure blocks, and synchronize PNG/PDF figure formats.

Pure-static, local-first research workbench: literature library, calendar, submission tracking, AI assistant, API quota monitoring. Zero dependencies.

Quarto extension for MANIT-style PhD thesis formatting