Skip to content
Navigation Menu
Sign in
Appearance settings
Platform
AI CODE CREATION
GitHub Copilot
Write better code with AI
GitHub Copilot app
Direct agents from issue to merge
MCP Registry
Integrate external tools
DEVELOPER WORKFLOWS
Actions
Automate any workflow
Codespaces
Instant dev environments
Issues
Plan and track work
Code Review
Manage code changes
Code Quality
Enforce quality at merge
APPLICATION SECURITY
GitHub Advanced Security
Find and fix vulnerabilities
Code security
Secure your code as you build
Secret protection
Stop leaks before they start
EXPLORE
Why GitHub
Documentation
Blog
Changelog
Marketplace
View all features
Solutions
BY COMPANY SIZE
Enterprises
Small and medium teams
Startups
Nonprofits
BY USE CASE
App Modernization
DevSecOps
DevOps
CI/CD
View all use cases
BY INDUSTRY
Healthcare
Financial services
Manufacturing
Government
View all industries
View all solutions
Resources
EXPLORE BY TOPIC
AI
Software Development
DevOps
Security
View all topics
EXPLORE BY TYPE
Customer stories
Events & webinars
Ebooks & reports
Business insights
GitHub Skills
SUPPORT & SERVICES
Documentation
Customer support
Community forum
Trust center
Partners
View all resources
Open Source
COMMUNITY
GitHub Sponsors
Fund open source developers
PROGRAMS
Security Lab
Maintainer Community
GitHub Stars
Archive Program
REPOSITORIES
Topics
Trending
Collections
Enterprise
ENTERPRISE SOLUTIONS
Enterprise platform
AI-powered developer platform
AVAILABLE ADD-ONS
GitHub Advanced Security
Enterprise-grade security features
Copilot for Business
Enterprise-grade AI features
Premium Support
Enterprise-grade 24/7 support
Pricing
Search
/
Sign in
Sign up
Appearance settings
You signed in with another tab or window.
Reload
to refresh your session.
You signed out in another tab or window.
Reload
to refresh your session.
You switched accounts on another tab or window.
Reload
to refresh your session.
Dismiss alert
{{ message }}
Uh oh!
There was an error while loading.
Please reload this page
.
avitai
/
DiffBio
Public
Notifications
You must be signed in to change notification settings
Fork
0
Star
1
Code
Issues
0
Pull requests
0
Discussions
Actions
Projects
Security and quality
0
Insights
Additional navigation options
Code
Issues
Pull requests
Discussions
Actions
Projects
Security and quality
Insights
Actions: avitai/DiffBio
Actions
All workflows
Workflows
Code Quality Checks
Code Quality Checks
Deploy Documentation
Deploy Documentation
DiffBio Build Verification
DiffBio Build Verification
DiffBio CI
DiffBio CI
Publish to PyPI
Publish to PyPI
Security
Security
Show more workflows...
Management
Caches
Deployments
DiffBio CI
DiffBio CI
Actions
Loading...
Loading
Sorry, something went wrong.
Uh oh!
There was an error while loading.
Please reload this page
.
will be ignored since log searching is not yet available
Show workflow options
Create status badge
Create status badge
Loading
Uh oh!
There was an error while loading.
Please reload this page
.
ci.yml
will be ignored since log searching is not yet available
61 workflow runs
61 workflow runs
Event
Filter by Event
Sorry, something went wrong.
Filter
Loading
Sorry, something went wrong.
No matching events.
Status
Filter by Status
Sorry, something went wrong.
Filter
Loading
Sorry, something went wrong.
No matching statuses.
Branch
Filter by Branch
Sorry, something went wrong.
Filter
Loading
Sorry, something went wrong.
No matching branches.
Actor
Filter by Actor
Sorry, something went wrong.
Filter
Loading
Sorry, something went wrong.
No matching users.
Release 0.1.1
DiffBio CI
#61:
Commit
9361cd7
pushed by
mahdi-shafiei
16m 19s
main
main
16m 19s
View workflow file
Align the jax stack, name the CUDA extra for CUDA, and drop Python 3.11
DiffBio CI
#60:
Commit
49c709c
pushed by
mahdi-shafiei
21m 1s
main
main
21m 1s
View workflow file
Align the jax stack, name the CUDA extra for CUDA, and drop Python 3.11
DiffBio CI
#59:
Commit
536c794
pushed by
mahdi-shafiei
20m 12s
main
main
20m 12s
View workflow file
Align the jax stack, name the CUDA extra for CUDA, and drop Python 3.11
DiffBio CI
#58:
Pull request
#10
synchronize by
mahdi-shafiei
19m 59s
chore/align-jax-ecosystem-and-drop-py311
chore/align-jax-ecosystem-and-drop-py311
19m 59s
View #10
View workflow file
Align the jax stack, name the CUDA extra for CUDA, and drop Python 3.11
DiffBio CI
#57:
Pull request
#10
synchronize by
mahdi-shafiei
21m 10s
chore/align-jax-ecosystem-and-drop-py311
chore/align-jax-ecosystem-and-drop-py311
21m 10s
View #10
View workflow file
Align the jax stack, name the CUDA extra for CUDA, and drop Python 3.11
DiffBio CI
#56:
Pull request
#10
opened by
mahdi-shafiei
19m 15s
chore/align-jax-ecosystem-and-drop-py311
chore/align-jax-ecosystem-and-drop-py311
19m 15s
View #10
View workflow file
Install the chem extra in the jobs that exercise RDKit
DiffBio CI
#55:
Commit
80fe354
pushed by
mahdi-shafiei
23m 43s
main
main
23m 43s
View workflow file
Install the chem extra in the jobs that exercise RDKit
DiffBio CI
#54:
Pull request
#9
opened by
mahdi-shafiei
26m 2s
ci/install-the-chem-extra-for-tests
ci/install-the-chem-extra-for-tests
26m 2s
View #9
View workflow file
Move RDKit to an optional extra and load it lazily
DiffBio CI
#53:
Commit
b4068d3
pushed by
mahdi-shafiei
17m 45s
main
main
17m 45s
View workflow file
chore: slim DiffBio runtime dependencies
DiffBio CI
#52:
Pull request
#3
synchronize by
mahdi-shafiei
17m 15s
chore/slim-runtime-dependencies
chore/slim-runtime-dependencies
17m 15s
View #3
View workflow file
Install CI environments from uv.lock
DiffBio CI
#51:
Commit
57ae4b3
pushed by
mahdi-shafiei
5m 33s
main
main
5m 33s
View workflow file
Add a security policy and three issue templates
DiffBio CI
#50:
Commit
77c593f
pushed by
mahdi-shafiei
2m 4s
main
main
2m 4s
View workflow file
Ignore private working notes and assistant configuration
DiffBio CI
#49:
Commit
fa841a0
pushed by
mahdi-shafiei
4s
main
main
4s
View workflow file
docs: rewrite the README status notice and fix the opifex URL casing
DiffBio CI
#48:
Commit
e3f6169
pushed by
mahdi-shafiei
5s
main
main
5s
View workflow file
chore: slim DiffBio runtime dependencies
DiffBio CI
#47:
Pull request
#3
synchronize by
mahdi-shafiei
41s
chore/slim-runtime-dependencies
chore/slim-runtime-dependencies
41s
View #3
View workflow file
Refresh uv.lock to clear known vulnerabilities
DiffBio CI
#46:
Commit
81d966f
pushed by
mahdi-shafiei
1m 12s
main
main
1m 12s
View workflow file
Install CI environments from uv.lock
DiffBio CI
#45:
Pull request
#8
synchronize by
mahdi-shafiei
19m 42s
ci/install-from-the-lock
ci/install-from-the-lock
19m 42s
View #8
View workflow file
Install CI environments from uv.lock
DiffBio CI
#44:
Pull request
#8
opened by
mahdi-shafiei
1m 53s
ci/install-from-the-lock
ci/install-from-the-lock
1m 53s
View #8
View workflow file
Add a security policy and three issue templates
DiffBio CI
#43:
Pull request
#7
opened by
mahdi-shafiei
21m 55s
docs/community-files
docs/community-files
21m 55s
View #7
View workflow file
Refresh uv.lock to clear known vulnerabilities
DiffBio CI
#42:
Pull request
#6
opened by
mahdi-shafiei
21m 15s
chore/refresh-uv-lock
chore/refresh-uv-lock
21m 15s
View #6
View workflow file
Ignore private working notes and assistant configuration
DiffBio CI
#41:
Pull request
#5
opened by
mahdi-shafiei
22m 3s
chore/ignore-private-working-files
chore/ignore-private-working-files
22m 3s
View #5
View workflow file
docs: rewrite the README status notice and fix the opifex URL casing
DiffBio CI
#40:
Pull request
#4
opened by
mahdi-shafiei
20m 2s
docs/readme-launch-readiness
docs/readme-launch-readiness
20m 2s
View #4
View workflow file
docs(paper): add gain-vs-gene-budget figure and computational-cost table
DiffBio CI
#39:
Commit
1ea84a3
pushed by
mahdi-shafiei
21m 55s
main
main
21m 55s
View workflow file
test(normalization): skip the scanpy-parity test when scanpy is absent
DiffBio CI
#38:
Commit
f5f845d
pushed by
mahdi-shafiei
23m 6s
main
main
23m 6s
View workflow file
docs(paper): add leakage and overfitting audit, data splits, reproduc…
DiffBio CI
#37:
Commit
97af4bd
pushed by
mahdi-shafiei
17m 42s
main
main
17m 42s
View workflow file
Previous
1
2
3
Next
You can’t perform that action at this time.